ESMFold2 and the Power of Vanilla Transformers
BioHub’s ESMFold2 demonstrates that vanilla BERT-like transformer models can outperform specialized biological architectures like AlphaFold3 in protein-related tasks. By scaling compute and training on vast, diverse biological sequence data, these models are proving that general-purpose architectures can successfully solve complex problems in therapeutics and immunology.
Source: Latent Space